Genomic Location: ptg000019l:1913766...1918566
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families
| CDS |
| PcrG001007.mRNA1 |
| Transcript |
| PcrG001007.mRNA1 |
| Protein |
| PcrG001007.mRNA1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR028608 all species → | Family | Probable cytosolic iron-sulfur protein assembly protein, CIAO1/Cia1 | Interproscan |
| IPR020472 all species → | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR036322 all species → | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR019775 all species → | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19920 all species → | WD40 PROTEIN CIAO1 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0016226 all species → | Biological Process | iron-sulfur cluster assembly | Interproscan |
| GO:0097361 all species → | Cellular Component | cytosolic [4Fe-4S] assembly targeting complex | Interproscan |
| KO | Enzyme | Enzyme ID | Pathway | Map ID | Source |
|---|---|---|---|---|---|
| K24730 | CIAO1, CIA1; cytosolic iron-sulfur protein assembly protein CIAO1 | - | Domain-containing proteins not elsewhere classified | ko04990 | deepkoala |
