Detailed information of PcrG001328.mRNA1 in Podabacia crustacea

Genomic Location: ptg000029l:1923626...1929036
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006838 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13639
all species →		zf-RING_2Ring finger domainDomainInterproscan
PF02225
all species →		PAPA domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001841
all species →		DomainZinc finger, RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR046450
all species →		Homologous_superfamilyPA domain superfamilyInterproscan
IPR003137
all species →		DomainPA domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46539
all species →		E3 UBIQUITIN-PROTEIN LIGASE ATL42Interproscan

 Gene Ontology
No Gene Ontology signature was recorded for PcrG001328.mRNA1 in Podabacia crustacea.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K15692RNF13, RZF; E3 ubiquitin-protein ligase RNF13EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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