Detailed information of PcrG002007.mRNA1 in Podabacia crustacea

Genomic Location: ptg000047l:2741731...2746415
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000236 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00589
all species →
Phage_integrasePhage integrase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050090
all species →
FamilyBacterial tyrosine recombinase XerC/XerD complexInterproscan
IPR002104
all species →
DomainIntegrase, catalytic domainInterproscan
IPR013762
all species →
Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR011010
all species →
Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR30349
all species →
PHAGE INTEGRASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →
Molecular FunctionDNA bindingInterproscan
GO:0006310
all species →
Biological ProcessDNA recombinationInterproscan
GO:0015074
all species →
Biological ProcessDNA integrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG002007.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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