Gene detail

Detailed information of PcrG004513.mRNA1 in Podabacia crustacea

Genomic Location: ptg000104l:1871170...1884120
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008760 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10262 all species →	Rdx	Rdx family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011893 all species →	Family	Selenoprotein, Rdx-type	Interproscan
IPR019389 all species →	Family	Selenoprotein T	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13544 all species →	SELENOPROTEIN T	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004791 all species →	Molecular Function	thioredoxin-disulfide reductase (NADPH) activity	Interproscan
GO:0005789 all species →	Cellular Component	endoplasmic reticulum membrane	Interproscan
GO:0045454 all species →	Biological Process	cell redox homeostasis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K22366	SELENOT; thioredoxin reductase-like selenoprotein T	-	Amino acid metabolism	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.