Gene detail

Detailed information of PcrG005156.mRNA1 in Podabacia crustacea

Genomic Location: ptg000112l:1332350...1339167
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00717 all species →	Peptidase_S24	Peptidase S24-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001733 all species →	Family	Peptidase S26B	Interproscan
IPR019533 all species →	Domain	Peptidase S26	Interproscan
IPR015927 all species →	Domain	Peptidase S24/S26A/S26B/S26C	Interproscan
IPR019758 all species →	Conserved_site	Peptidase S26A, signal peptidase I, conserved site	Interproscan
IPR019756 all species →	Active_site	Peptidase S26A, signal peptidase I, serine active site	Interproscan
IPR036286 all species →	Homologous_superfamily	LexA/Signal peptidase-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10806 all species →	SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006465 all species →	Biological Process	signal peptide processing	Interproscan
GO:0008233 all species →	Molecular Function	peptidase activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0005787 all species →	Cellular Component	signal peptidase complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13280	SEC11, sipW; signal peptidase I	EC:3.4.21.89	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.