Detailed information of PcrG005174.mRNA1 in Podabacia crustacea

Genomic Location: ptg000112l:1680785...1716382
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00804
all species →
SyntaxinSyntaxinDomainInterproscan
PF00071
all species →
RasRas familyDomainInterproscan
PF00560
all species →
LRR_1Leucine Rich RepeatRepeatInterproscan
PF20706
all species →
GT4-conflictFamily 4 Glycosyltransferase in conflict systemsFamilyInterproscan
PF16095
all species →
CORC-terminal of Roc, COR, domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006011
all species →
DomainSyntaxin, N-terminal domainInterproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan
IPR001806
all species →
FamilySmall GTPaseInterproscan
IPR003591
all species →
RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR036388
all species →
Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR005225
all species →
DomainSmall GTP-binding protein domainInterproscan
IPR010989
all species →
Homologous_superfamilySNAREInterproscan
IPR032171
all species →
DomainC-terminal of Roc (COR) domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24073
all species →
DRAB5-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003924
all species →
Molecular FunctionGTPase activityInterproscan
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005768
all species →
Cellular ComponentendosomeInterproscan
GO:0005769
all species →
Cellular Componentearly endosomeInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0006897
all species →
Biological ProcessendocytosisInterproscan
GO:0012505
all species →
Cellular Componentendomembrane systemInterproscan
GO:0030100
all species →
Biological Processregulation of endocytosisInterproscan
GO:0030139
all species →
Cellular Componentendocytic vesicleInterproscan
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG005174.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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