Gene detail

Detailed information of PcrG005292.mRNA1 in Podabacia crustacea

Genomic Location: ptg000119l:1176668...1240653
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005679 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14822 all species →	Vasohibin	Vasohibin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR028131 all species →	Family	Tubulinyl-Tyr carboxypeptidase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15750 all species →	VASOHIBIN-1-LIKE ISOFORM X2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0045765 all species →	Biological Process	regulation of angiogenesis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23355	VASH; tubulinyl-Tyr carboxypeptidase	EC:3.4.17.17	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.