Gene detail

Detailed information of PcrG005377.mRNA1 in Podabacia crustacea

Genomic Location: ptg000120l:1493923...1494519
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01242 all species →	PTPS	6-pyruvoyl tetrahydropterin synthase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007115 all species →	Family	6-pyruvoyl tetrahydropterin synthase/QueD family	Interproscan
IPR038418 all species →	Homologous_superfamily	6-pyruvoyl tetrahydropterin synthase/QueD superfamily	Interproscan
IPR022470 all species →	Active_site	6-pyruvoyl tetrahydropterin synthase, cysteine active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12589 all species →	PYRUVOYL TETRAHYDROBIOPTERIN SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0003874 all species →	Molecular Function	6-pyruvoyltetrahydropterin synthase activity	Interproscan
GO:0006729 all species →	Biological Process	tetrahydrobiopterin biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01737	queD, ptpS, PTS; 6-pyruvoyltetrahydropterin/6-carboxytetrahydropterin synthase	EC:4.2.3.12 EC:4.1.2.50	Transfer RNA biogenesis	ko03016	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.