Detailed information of PcrG006209.mRNA1 in Podabacia crustacea

Genomic Location: ptg000160l:1367436...1389283
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00013
all species →
KH_1KH domainDomainInterproscan
PF16274
all species →
Qua1Qua1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR045071
all species →
FamilyKH domain-containing BBP-likeInterproscan
IPR036612
all species →
Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR004087
all species →
DomainK Homology domainInterproscan
IPR004088
all species →
DomainK Homology domain, type 1Interproscan
IPR032571
all species →
DomainKHDRBS, Qua1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11208
all species →
RNA-BINDING PROTEIN RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000381
all species →
Biological Processregulation of alternative mRNA splicing, via spliceosomeInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0048024
all species →
Biological Processregulation of mRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG006209.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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