Gene detail

Detailed information of PcrG006314.mRNA1 in Podabacia crustacea

Genomic Location: ptg000176l:372196...387918
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

PcrG006314.mRNA1

ACGGTCGCATTTCTCTGGACTTCACTTCCGCACACTAGCTAGTTTAATAGTGCAATCCACGAACTGTGAGCGAACCACGAACATGCCCTTGATAATCGATGGCAAAGTTGAAGATTCGCGACTCAACTCTTTCGTGGATTTTGCTGTTAAACATAAAAGTTTTAAGGAGAGTGCAGAAACATTTTGTAAGAAACCAGTTAGAACAGTTGGAAGAAGTGGCAGTCTCTATGTTACACAGAGGGAGTATGCTACTGTCTCTCAGGATGATGAAAACATCACTGTATTAGGGTCTGAAGACGCTACAACTTGTCATATAGTTGTACTGCGACACACAGGGTCAGAAGTGACCAGTGTAGGACACTTTGATGGACATGATACTGACCAGGGATTAAAAGGCATGATTGCATCTGTAAATCACATTTCCAAATCAAAGTGTGACAGTGGAAGATTTGAACTTCACTTGTTTGGAGGATTCCTTGATGATAGGGGAACATCTGACAAATTAACAATATCCATTTTAAGTGAAATACAGAATCAAGATAAACCTATTCATTTATGTTCAGCTTCTGTCACAGGATTTAATGATACAGTTGAGAAGCGTTTACACAAACCCATCATCTATGGAATAGGCATTAACATTCAAGATGGTGAAATTTACCCAGCATCATTTGCAGACAAGGGTCCTGATGAATGCATTCGACATGCCCGTATATTCGGAGGTGTTCGTGGGATGGTGGAAATTTACAGTTCATCTTATAAGGAACTGCGAATCATGCCATATGATTATCAAGAGAGCATGCCAGCAGTATACATGCGGTTCTTTCGTGATGCACCTGACGACATCATACTAAAAAATCTTTCCACATCTCCACATTGTGAACCCCTGGACTTTGTATCTAACACTAGAGCGACTCTGAATCATATTCTTACTCATCCAGAGCCTTTGATCACTGTGTTTCCAGAAGGAAAGCCTCGTGTTTACAAGCGACTGGATGGTGTGGACCGGTGGACTCGTATGTCATAGGTTAAAATACTTTTATAAAGAAAATTTCGTTTTTTCTTTTAAGTGAAATTTATTTGTGCACGAAAAATATCACGAACGGGTGCCAAATAAAAATTTAAATCGATGTTATCAAAACTAAGCCAAAGTTGAGACTTTTCTAATAGGAGTGACTGATACTAAATATCTTTTAATTGTATGGGGAAAACTACATATATGAATTGCCATATAATTCATAGTCTTCCTTTTATTTCTGGCTTCCTATAAAGAAGTTAAAAGAAAATGTAAAGCTGAAAATCTCATTGCTGCGAAATGTGCAGTCaactctcataagggacagtgccggtcctgatggcgttcgttttaaaggacgttcactgtactacttttagatgatcaaGGCTAAGTGGAAACTCTTCCTACTAAATTTTCATTTATAAAGACTATATTACATACCATAGGTGTCAACTGAACTAAGATAAAAATGTGGAAAATTAGTGCAAGAGGCATCCAGTAAGGACATGGCGAAGTGTAAGTAGTGTAACTTAAAAGggccatgctattttaggcaatttcagcattggtcagttcctcgttgaattaaagggggagaccctaagctacaaaatagctgaaaatggttgctagggatgtctgcgaaccgtcatagcttgagctcccttagtaccctggggttggattttggtcatgtttcttccagtggaggttgccaccactttggtaagtcatgtgatctgaaaacaaaaactccgaagactccggcagcttccatctcgcttcgatggaacaaatgccaacaatagagtgcattcagatgcaaaactgacatatgggtttgttgtgatttgcgttacctaaaaagtaatgacgtcataaagttattgtgtcgtcatatcttttcaataacttaaatttcaacaaatccTTAATCctaacttttttcgatactaggcagtgggctgtaagcacaataaatcactagtccacaagggcaagccactagtccaaaacaaggccagaaagaaatgcacttacaaaaggctagatggaattttggaaccattcccctctttgtgtcctgccccttcccgaaatacttttatttctcgatttacacttgaaaagactgtaatgacatgaaaacgtggcccaaggacctaaggccttttccttgtagctaagtagtctgggggttattaggagtgcattttcactagcccaccatgaagttttactagtccttggctagtggactaaggttactgtcgcccactgAAGTATCATATTGTAAGTAGTGTAAGTATCATATTGTAAGTCGTATAATTAGTAATAAGTATCATATTGTAAGTCGTATAATTGTTAAATATAAGTATATTGTAAGTAGTGTAAGTATCATATTGTAAGTCGTATAATTGGTAATGTGTCATATTGTAAGTAGTGTAAGTATCATATTGTATCATGCTGTAAATAGTAGTTGTTGTGATAAAAAAGTAAGACACTAAATGTAATTTCCAATATGACAATAGAATTGCCGACAGTGGCGAGAGGTTGTTTTAGGTGTGCGGGCCTGGGACTTGTCGTTCTTACCAGCACAGCCAAGTGGTGCTTTACCAAGCTAATTTGAGAGTATTTTTGAAGCAACCTAGGAACGAATCTTTGATACACGGTGATCTTCTTCAATAGACTTGCTGCAGGCGGTGTGTGCATTCTGATTACACAGAATTTTGAAATAGTTTTAAAACCCGATGCTATATCAGTCCTTACTTATGCTTTTCTTGGAACAAAATACAATTAACTaagggcgcattcatttacagcatacgcgtatagtcatcgcatttgcccgttggaattttcattgcttctTTTAGCTCGaaaacaataaaaaactccaccgggcaaatgcgaaaggttatacgcgtatactgcaaataaaggcgcCCTAAGTAAAAACGCCCACCCGtttttttcaaaaacagcgatttttgattactgataaacaaataacattctccccttgaaaggagcctctgcaataggaatttccaacaaagaaattagctaacaacGACAGAAGAAGCGAGAAGTGCAGAAGAAAGTTTTGTTGAATCTACAACAACTGTTGGTGCTATAAACACTTTATTAAATAGTTGTGCGTGTTTCGCTGGAAAATAACGTGAAAATACACCATTCCCAAAACACTCATGGTAACCAACTTTGTGaggatatcgatgacgtcatttcgagccatCAGCCGTCATGACGTCATTTCTCGTGGCAAAAACAAAATTGAGTTGTGCCATCATGAAATCataaaattcatatcttcttgccaccgtgtaatgtcttctTTGAACACTCTTTACAACAATATAAGTGATTAACGGTAAATCGAAAAAGTCATCACCTAATAGGAAACTGTCACAAATCAAAGTGCTCTATGAGCCAACAACTGTTTTACATCAGAAAAAATGCTGTGCAGAATGTGAAGTATGAATAGCAGTTGGTTTTATggtgagtttatttgggatgtcatgagacggatcagtgatctcagatcactcaggtcatggtgaaggaaccggctaatccttgagtccttgtccagagatgatttgtcggttccttttgatgcaccataacacgagtgatcttggatcaaacattctgatccggatcatcctaaaggaaTAATTAAAACAATTGTGTACATACAGAATAAAGGTTTGATGGAACGTGGCGTTTACCACAATTTaaaacaaaaaaagaacaaaaataaaaacaaTTGTCGAAAGTGAAATGAATATCAACATATTTTGCATTTAATTTTGaatgattcaaagtggacagaccatgatctgaattgcggctcctgtagatatctaattgccgtaaccgttcatcagtaggatGGCATGAAGTTCAAAGCAGCGTTTTTTCAGTTCCTTCACCTCGAGACTCGACTGAGATGTTCATACTGAACAAGACTTTATTTAGGGAATTTCCTGATTCCTTTGCTATATAAACTTTATAGACAATTTTGTAGCAAAATAAATACTTTCATTGACTCATTTAAAAGGTTGACCTAAAACAGACAAAAAGAGTTTGATTTCTTATTCTTCACTTCCTCACTTAAAATTATAGAAATTGCCTGAAGCGAGCTTATATGATCAGGTACTTGTAATCCCGCCTTATGATGTAACTCGTTCGCTTGCTTGTTTTGCTGATGCCGAGAAAGCAGCAATCCAGTTGATATAGTACActatttgtaatttctaatctaacatgattgtgactcagaattgagttgatagtaaaatcttg

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14736 all species →	N_Asn_amidohyd	Protein N-terminal asparagine amidohydrolase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026750 all species →	Family	Protein N-terminal asparagine amidohydrolase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12498 all species →	N-TERMINAL ASPARAGINE AMIDOHYDROLASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006511 all species →	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0008418 all species →	Molecular Function	protein-N-terminal asparagine amidohydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14662	NTAN1; protein N-terminal asparagine amidohydrolase	EC:3.5.1.121	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.