Detailed information of PcrG008570.mRNA1 in Podabacia crustacea

Genomic Location: ptg000282l:509633...511492
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Ubiquitin familyE3|E3 activity RING|PHD · all ubiquitin genes in this species
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10263
all species →
SprT-likeSprT-like familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011011
all species →
Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR003653
all species →
DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR019786
all species →
Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR001965
all species →
DomainZinc finger, PHD-typeInterproscan
IPR038765
all species →
Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR006640
all species →
DomainSprT-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR34718
all species →
PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →
Biological ProcessproteolysisInterproscan
GO:0008234
all species →
Molecular Functioncysteine-type peptidase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG008570.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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