Detailed information of PcrG009354.mRNA1 in Podabacia crustacea

Genomic Location: ptg000300l:1261862...1279456
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00076
all species →
RRM_1RNA recognition motifDomainInterproscan
PF11835
all species →
RRM_8RRM-like domainDomainInterproscan
PF13893
all species →
RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035979
all species →
Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012677
all species →
Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504
all species →
DomainRNA recognition motif domainInterproscan
IPR021790
all species →
DomainPTBP1-like, RNA recognition motif 2Interproscan
IPR006536
all species →
FamilyHnRNP-L/PTBInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592
all species →
MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003676
all species →
Molecular Functionnucleic acid bindingInterproscan
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0043484
all species →
Biological Processregulation of RNA splicingInterproscan
GO:0006397
all species →
Biological ProcessmRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG009354.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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