Gene detail

Detailed information of PcrG009588.mRNA1 in Podabacia crustacea

Genomic Location: ptg000310l:307473...319323
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01008 all species →	IF-2B	Initiation factor 2 subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042529 all species →	Homologous_superfamily	Initiation factor 2B-like, C-terminal	Interproscan
IPR042528 all species →	Homologous_superfamily	Translation initiation factor eIF-2B subunit alpha, N-terminal	Interproscan
IPR051501 all species →	Family	Eukaryotic initiation factor 2B subunits alpha/beta/delta	Interproscan
IPR000649 all species →	Family	Initiation factor 2B-related	Interproscan
IPR037171 all species →	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45860 all species →	TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0005085 all species →	Molecular Function	guanyl-nucleotide exchange factor activity	Interproscan
GO:0005851 all species →	Cellular Component	eukaryotic translation initiation factor 2B complex	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0044237 all species →	Biological Process	obsolete cellular metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03239	EIF2B1; translation initiation factor eIF-2B subunit alpha	-	Translation factors	ko03012	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.