Genomic Location: ptg000320l:7641...12043
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families
| CDS |
| PcrG009799.mRNA1 |
| Transcript |
| PcrG009799.mRNA1 |
| Protein |
| PcrG009799.mRNA1 |
| Family type | Membership / link |
|---|---|
| Ubiquitin family | UBD|Other|Beta-prp · all ubiquitin genes in this species |
| Ubiquitin family | E3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00400 all species → | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF05485 all species → | THAP | THAP domain | Domain | Interproscan |
| PF07676 all species → | PD40 | WD40-like Beta Propeller Repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 all species → | Repeat | WD40 repeat | Interproscan |
| IPR006612 all species → | Domain | THAP-type zinc finger | Interproscan |
| IPR040132 all species → | Family | TREX component Tex1/THOC3 | Interproscan |
| IPR015943 all species → | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR011659 all species → | Repeat | WD40-like beta propeller | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22839 all species → | THO COMPLEX SUBUNIT 3 THO3 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0005515 all species → | Molecular Function | protein binding | Interproscan |
| GO:0000445 all species → | Cellular Component | THO complex part of transcription export complex | Interproscan |
| GO:0006406 all species → | Biological Process | mRNA export from nucleus | Interproscan |
PcrG009799.mRNA1.
