Gene detail

Detailed information of PcrG010273.mRNA1 in Podabacia crustacea

Genomic Location: ptg000348l:1197202...1214244
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

PcrG010273.mRNA1

GTTGGTTGCGAATTCATCAATATTTTTCTACAAAACGTTCGAGATTCGTTGCATGCTTCGCAGTTGTTATTTTCACTTGCAATATCAACGCGCTGGATTTTAACTCAGCAGGGTATTTATCTTTTCAGTCTGACTGTTTAAACAAAATAGGATTTGCGTGTCTTTTCTCGCGTTTATATTAGAGCACCCGAGCATGTCGACTACTGTAACACCGAGAAGCACGAAGACCCAAGTGGAAGCTTCGAAGCGCTGGAGCGCCCCACCACGATCACGGTCGGCCGGACGTGCGGTTCGATCTCCTGATGAAGTAGTCCGCGATGTGCGTGGCCTCAAGATGCGACAGAGAGTTTCCTTAGCCCTTGCTGATGATATCCTGCGAGGAGAGTTGGAAGACATGGTTTCCGCGCACAGTCAAAGACCGATCAGTCCGGACGCCTTCCGCACGTATCAAGACTTCTTGATCCCTTCGGGGTCATTGTACGGAGGTGCGTTCCCGATTTTTTCCTCCTCCGTCATAGCAGACATCAGAGGGGCCGATACACTGCACTACTCGAAGTTTGAAAGGCAACTTCGTTGCAAAGTGGCTTCGGTTTATCGTCTCATGCAGATGTTTGGATGGGGAAAAGGAGTTTGCGATCGCGCTGCCTGCACAGTTTCTGCTTCTGAGAATGACAATGAAGAGAACAACTATTTTGTTGCACCTACTGGCTTGCTATTCAATGAGGTGACGGCATCTTCAATTCTGAAAGTTGACCACAAAGGGAATGTTGTTGAAGCAGGAAACACAAACTTGGGAATCTCTCAGTCAGCATTTGAGCTTCATTCTATCATTCACTCAACAAGGAAAGATGCAAAGTGTGTTATGTTTGTGTCAGCTGACTCTGTGAAAGCTATATCTGCAGTAAAATCAGGACTTGTACCAATTTCTCAAGAAGGAATAGCTGTTGGAGAAGTTTCCTACCACATGTTTCCTGGAATGAAGTTGGATGAAGAAACCAGGGATTCATTAATTAACAGCTTTGGACCATCAAGCAGGGTGTTAATTTTAAGGAATTTTGGTGCCATTTGTGTTGGAGAGACAATAGAAGAGACTACCTACCTTGCCTACCAACTTGTCACTGCTTGTGATCAACAGCTTTCTGCGATGAGTGCAGGGGCAGATGAGCTGATAAAAATCGATGAGGAAGCCAAGGAACAGATGGATAACGCTCTATATGGAGGCCTGGATGCTAATATGAACCAGCAGAAGATGGCAGAAGTGCACTTTGAGGCCTGGATGAGACTTTTGGATTCTAGGGGCTGTAAAACAGGCTATACCTACCGCAACCCTGACATCTTTAAATCAGAAGAGAAGGAACCAAAATCACGCGAAGCCACCCCAGCCAAGACTTCCACTGCGCGTACAGAGATGACAATCTACCGCGACGCCAATATACGCCGCACCGCATCACTCGGGCGAGGAAACACTTACAGGAGTCGTCTCAAGTGGCTTAACGCACCTGTCAAAGCCACCGAGTACAAGAGAGAGCGGGAACTGGACCATTCTGAGCCCGTACTAATTAAGGACAGGAAGCCAGAAAAAGAGGACAAAGACGATGAGGAAGTTTTTATCACTACTAAAGTCATTTCAGTTCACCAGTCTGCACCTGAGCTGCCTCATGAGGAAGTCACGGAAGAAGTGACCTTTGAACGCGCCCAGGAAAGGCACTTTGCACCTCAGGAGTTCCAGTTGCTCATAGATGACTCCCAGGATGGTGAGCAGCCTGTGGTGTTAGAGCTGGTACGAGAGCCTGTCGGTCTTGTGCGGAGGAAGTCTGGGAACAAGGTGAAGAAACGACGAAGTTTTAGGGATAAGTTTGCTAAGAGGTTGAGCAGTGGACAGTAGAAAAAGTCACTTGTAAACTCATTAATCTGGTCTCTTTTCACGCTGAAAACTGTTTTGACTTTAGTAGTATTTCATATTTACTCCTAATAATCTTGTTCTATTGACACTTCTGTTCGTTTCCAGAGCCCATTGTTCCAACTGGGCACAGTCGGAGGATATTTATAGGCTCTGGGAACAAGATTTTTAAGATCTTTAGCGGGCGTGGTTTTTACCGAAATTACAAAATCCACATTTTGTTTGAGAGTTTTTTTTTTTAAGAAATTTATGACGGAAATTACTTTCTTTGCCTTTTTAAAGTTAAGTTAAGATTTACACGCTTTCGCAAAGTCTCAGGGAAGAGGGACTTCAGCTGTAGGATTTAGGCAGTGAAAAGTATCTTTTTCACTGCGATTACACATAGGCAAAACACGCACGCATTCGCACAAGAACCTACACGAATTCACTCGTTACACGCATACTCTCTCGTCAATTTTGAAATGGACACGCGCTCGAATGGCCTTTCCTGCTCGCTTTTCGTTCACGTCGCGTGCATTACATATTTATATAAAACGCCGGGCGCATGATCACACGTGTAACGACCGTACAGCACATCAATTCAGTGCTTTTTAAATTAAATTCGTAATATTTATGCGTGCTTTTTATCTATAGTGGACTTTTTCTCTTTTATAGAGTGCTGTCTCGAAGCACCTTTCTTATGCATGTTTTTATAATCTGGAGGAATTTAAACTTCGGTTTTGAATTAATGGCTAATGGTTTTAAATTGAAAAGTAAAGTCGCAGTACGTATTTAAATCGAGCTGTTTTCTAAAGTGAAGGCATATGCAAGATATCTTTTGCCTTGTTTAGTTGACTTAAACTAATAACATGGGAAACGGGTATCTGCAGGGGTAGTAGTTTGCGGAGTATAATCATGATTTCAATTTTTGCGTATTTTGTTTTTAATTTTTGTGGCTCATATTTCCAAGGGATATAGTCTAGATTCGTACCTTCCACACTTATTAACCAAAATAGTTGTACACCTTAGCTTTCTTACTTCTTGTTGAAATTTTTAAGAGATTCAGTCGAGCAGGTTGAGATTTTGAGGGACATAATTAAGTCGGTAAAAAAGGACTTTGGCTTAAAAAACTAAATCCTTAAAAAAAAATGTAGAAAATCTATGAAAAGCTCTTTGGAGTATTTGAACATTTGCTACGGGGAAGTTCAAAGGTTGGAAATGTAGCACTACTACATGACATATCATGTTATTTTTACCTGATAGCTCAATCTAAAGTTCTCGGGCTGATTGCTAGTGCAGTCATTTGTAAGCTCCATTTTGAGTAGTTTTTGTATGGCTTTCGTTAACTTAATTAAACTCACCTCAAACCATTTTCCGCCATGGTTGATAGTGTTTTACAAGACAAATACAAGTTCCACATAGCAGAGCGGGGGCTtgtcgtgaaactaaaagtaaagtaatcaaaactgaccaatcgagagagtcgtaaacagtgcagttaaccaatcaagattcggtgccaagcgtaggaaaacgtcacggttagacttagttttgaacctgattggCGCTCACTTGATTAATTTCAGCACGCTCACCCGCCTCGCCGAGTGTTCTGGACCAATCATAGAGTTCGTCAAAAACAGAACATAACGTGCGAAAGTCATCGATTAACTGCTTAGAAATGATTTCATTTAGGACAAGTTTTATTTAATTAACTATGAATGACTCGGGCCACGTTAATGTTTTATGTGAGTAATATAATTACTTGCAAACTGGCCTTTGGAGTTATTGGATGCCATGAACGATTCCCAACGACTATAATAGTTGTAGTATTTTATTCCTTCAGTCGTCGAAGACCACTtttaaattaatttaatttaattatgttgtgtaatgttatttaattaaaagtaatGGTATCAAGGTGGTCGTTGAAGAATTTTGCTTATTTTAGCCAAAAACTTTGCTACTTTGAGTCTCGTTCAAACGTCCTTCTCGTGTAGGTGATCGTGTGCTATTTCCCGCCAAAAACACACAGCAGTTTTCACTAAGTAGGTAGGCCAATCACTGAGGCGGAAATGCCTCAATCAACCAATCAGAGCTCAAAACAAAAACACGCAACCGGTGCGAACCCCACGAAAACTCGCATTAGGCAAGACACGTGATTGATTTTTGTTGCTTCTGATGAGTTAAACTCACGAATCCGACAGTCGCTTATCTTTAGCTCTTTGTGTTGCATTTTGGTTGGACGTTTAAACTTGGCTTAAGGTTTACCGCTCCAGGCTAGCAAGGCCATCCCGTTCTGTTTTTTGGGTTGTCCTGAGGACACGTTAGTGGCCATGAATAACTTAGCGACCTGGAGTCATTTCACTCATTCAGAGAGTAAAATGTAAAGCGGTACAGAAACAATAAACGCGGTAAGAAAATA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00596 all species →	Aldolase_II	Class II Aldolase and Adducin N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR051017 all species →	Family	Aldolase class II Adducin subfamily	Interproscan
IPR001303 all species →	Domain	Class II aldolase/adducin N-terminal	Interproscan
IPR036409 all species →	Homologous_superfamily	Class II aldolase/adducin N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10672 all species →	ADDUCIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005856 all species →	Cellular Component	cytoskeleton	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0014069 all species →	Cellular Component	postsynaptic density	Interproscan
GO:0051015 all species →	Molecular Function	actin filament binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG010273.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.