Gene detail

Detailed information of PcrG010380.mRNA1 in Podabacia crustacea

Genomic Location: ptg000352l:1629524...1638372
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08662 all species →	eIF2A	Eukaryotic translation initiation factor eIF2A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011387 all species →	Family	Translation initiation factor 2A	Interproscan
IPR013979 all species →	Domain	Translation initiation factor, beta propellor-like domain	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13227 all species →	EUKARYOTIC TRANSLATION INITIATION FACTOR 2A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000049 all species →	Molecular Function	tRNA binding	Interproscan
GO:0003729 all species →	Molecular Function	mRNA binding	Interproscan
GO:0003743 all species →	Molecular Function	translation initiation factor activity	Interproscan
GO:0006413 all species →	Biological Process	translational initiation	Interproscan
GO:0022627 all species →	Cellular Component	cytosolic small ribosomal subunit	Interproscan
GO:0043022 all species →	Molecular Function	ribosome binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG010380.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.