Gene detail

Detailed information of PcrG010766.mRNA1 in Podabacia crustacea

Genomic Location: ptg000374l:1350867...1375405
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

PcrG010766.mRNA1

ATGGCGGAGGATGCGGATGACCAACAATTGATGGCTGGCTCTCCTTGCGATGAAATCGACCCAGCAGAACTTTTTGAAAATCAAGGAGGTGTTGAGGTTGACCGCAATCCTGCAGATGACAGAGGCTCAGGTTCCGAATTCGACTCGGAGCGAGAGGAACATGTTGATTTGTCATCGGAGAACGAACTATCTGACGGATTCCCTTACGGAATCACTCCGCCAAGAAATGTcagaaggcaaaaagaaaaagctaaaagggacaaagaaaaGGTGCAGGGATTTCTAAAGAGTCCTTTAGCTCGAGAGTACGCAACTCATGCATCTGATAGAGCGGAACTAGACAGGCGGAAGAAGAGAGGGTCCACTCAGCTCACGACCGAGCGAGCTTACCAGAGAAAGCTCAAAAGAGGTAGTGTTGATGTTGGATTCGTAAGCGTTGAAGGTGGCGCTCATGTAGCAGATACCTCAAAGTCTTTAGAAATTCCCAGCATCAAGATCGAGTCGACAAGTCGATTCATGTCCTTGGACTGCGTTTGCGAAGATTCCACCGACGGTGCTTCTGCCAATACAAATACAAATACAAGTTTTGTCCGCACGAAATCAATTTCTATCAAAGGGACTACTCCACGAAGCCATCGGAGAGCAACTCGCTCAGAATCCGATCCCCGCAGCTCGACTTCCCGAAATTACCTCAATCCGTACTGTCCTGAGGCAAGAATGGAGTTTTACAGAACATTTTCTTTGCTGATCAAACTCGGGTCACTTGCTCATAAACAACAGGAGAGACAGTATGGAACGGATGGCAGTGCATTAGAAAGGCAAAGCTCAGAGGAGAACAAGAAATATCAGGTTGAGTTGTCGCAAGCGCTGTGGCTGGAACTACAGGCTTGGCATGCTAACAGAACAATGTGGGAACAAGATCTTTATTTAATACGGGCACGTGCTAATGTAGAAGAGGTGTTAAACGAAGTTATAAATTTTAAAGTCAAGAAACAGGATGTAAACAATCAGGTTTTAAATGAAAAAGTTGATCAGAACAGTCAAGATGGAAATGGCAATAGAGATCTGAGCAACAAAACTGATAACAAAGAATTCATTTTCACTCACGCAGACAGTGGTTCAGGCACATACGCTCAATTGACATGTCCTGTCAATTCTGTAATACACAACTCTTCTGAAAGTAATCAAACAGAACAATTTGACTCCTTAAAATCCCAGAAGACAGGAGGGTTTTCAGTTGAGACAAGTCAACAGTTTTTGTCAGAGACTGATAGCTTTGTTAATGGTCCTACCCCAAATGATTACAGAGCATTAAAAGGCCGACTGTGTTTAGATTTAAGTCAAAGGAACCAGAAACTTCACCCTGGTGAAGCTGGCTTCAAACCAGGAAGAGAAACTCTGCCAGATAGAACATGCTGTCAGCTGAAAGCTGCCATTGAGCAAGTAACTGAACTTTTTGACAAGGTTGAACATATAGAAAACCTTTACCCCACTCGTCAGTCCCTAGGAGAACAAAACCCAAAGTACACCAGCAAAGAGTTTACAAGAAACTTTGAGACAATGTGCTTGTGGTTGAATGTGACAAGTGAGTTATATCACAAGTTACATCTGATAGCAAAGTTTGTTGGCGTGAATACAGCTGAGGTGGAAACCTGGCACGACTGGCTTGATGTTGGTCTTGGAAGATTAGAAAGTATATGTCCTGTATCAGATCTGAATCATGATGATACTGGTGTAACTTTCTTCTCATCATCtgacaatgacgatgaagatgactatgatgatgatgatgacgacaatgTGGAGGGTCAAAACGAGAGAGGTGAAAATGGGGGCTCGTCAAACAGTGCACCCTCGTCACCACTTAGAACAATCTCATACGAGTCGCAAACCAGCACTCCAGCAAGACCTTCAAGGACAAGCAGTAACATGTCAAACTTTGTGTGGAGCTCAACCTCTCGCTACAGGCCATTTGTTGACCATAGCATCAAAAAGATGGGACTGATAAAACTTGGAAAGAGACTAGGGGACATTCTGGACAACAGCATGATGAAAGCTAGACATGCACTAGCTCTTCCAAGCAGTAACTGTGACGATGATGAGTGCCAGTGTTGTCCTGTGGCATTTGCACAAAGACAATGGTCTGTGAACTATTTGGAGTCACTTTTGAATGGAGAAGGGGGTGAACAATCATCTTGTTGTAGCTGTCATCCACACAGTACCATGTGTCACAGACGAGGCAATGCTGAACAAAGGATTTGGAGTGATGAGTTCAAGGAGACTGGTCTGCCTTCATTCCGTTCATTGTATCTGTTTTTATCACGTGTTCCACTTGACATAATCCATGAATGTCTGCGTTTGAGGTTACAACATCGTCCCAAAGGGGAACCATCGTCATTGAGTGTGAGACAGCTGTTGCGAGAGTGCAAGGATGTACTGTTAGGTGGAGTTCTTGTCAAAGACTATTACCTTGATCTTGTGGAAGGAATTACAAACTCCGAAGATGTTAGCAAGGAAAGCACAGATAGTGACATTGAAGGGTTTGAACAGGATCTACAGAGTTTGCTTCAGGTGTATTTTGAATACTTGCACAATGTGATCCACTTCGTGCAGAGGCTTCCGCAGGCATCTAAAGGACTAAAGAACATTCTTGAAGAGGAATGGAACTTTGTAAAGAAACACTGTCGTCATGTTAGAGGAGGAGAGGTTGAAGGAGGAACAAGATTTTGTGTAATGGCCTCAGGTTTGCTTGAGTCAACTGGTGATTTTCTGGAGTCAGAATTGGATCAGAGTTGTTCTGATCTTCATAACAACACTGATCAGAGCGACGATCTCAGGCGAAAAGTCCTGGAAGCTTGTAGAGGTTTTAAACACCTGTTTAATGAGGCAAGAGAAAGAGCTTCCAAAGCTCTTGGCTTCACAAAGAAACTGCGGAATGACCTGGAAAATGCTGCCAAGTTCAGTATTGATGTACCATTGTATGAACTGTTGACAAGATTAGAGGCTAGCGGTCATGTACAGGTTGTGGCAAGACACACTGCTGGTCTATTCATGTTTGTACCAAGAACAATGGTTAAGAAGAAATGCCAAATCATTCACCTCTTGAATTCCTGCTGTGTTCAAGAAGAATTTGGTGACCAAGTTGTTTCTGACAGTGAAGGATACCTCCTGATCATGCCGTCATGTGATGCAGAAAGTGGGAATGAGACACCAGTGACCTGGAGTGGTAAGAAGGTAGTGGTCAACCCAACAATGGACACTGCAATCAGTTTAGCAGACATACAGGTTGGGGGTATGATATTAGTTGTACAGAATTCCAAGGAGTTGGATGATCAACGTAAACTGTTTTTGGAAAGCATGAGTTTATCAGTCGGCATTGTGAAGCCAAGAACATCAAGCCATCAGGCCATTGCGGAAGCTCTTGATGAACTGCAGGATGCATGCCTCACACTTCGTGAAAAAATTGTCAACGCTGTTGAAAGAGTTGACGAGAACTTGGATCTGGACAGCATGTTTGAGATGGAGGAAACAGAGAAAGCAATGGTTTATCACACTTACACAGAAACAATGCACTTGTGTTACAACTTTGGTTTTGAGTATCAAAAAGAGGTAGCACGCTTGGTGTTTGGGGACAGAAAGGATGCTCTTGGCCTTAAAATGCTGGCCTTTGCCAAAAAATGGATGAAATTTGTGATGACAAAATGTGAGAGAGGAAGAGGCACAAGACCAAGATGGGCCAACCAAGGACTTGACTTCCTTACAGTAGCATGTGACCCTAAGACGTTGACAACTTTGTCAGAGTCTGCCTTCCAGGAGTTAAAGAAAGAGATCAACACATGTATCTGCCATGTCATTGGTAGTGCAGAGAGTTGCAGTGGAACAGCCAGCCCAGATAACAAACCTCTGACATCATACAGATCTCAAAGCCCAGCCTGTCCCTCGCCAGTATTTGGTAGGAATGCTGCACCAGCGGGGCTTTTAAGGCCACTATCTTGGCCTGCAGGAAAGCCCCCCAAATCTCCAGGGGACCCGGCAGAAACTGATGAAAGTCAAGCCACACGACGACAGCTGTCAGACCCTGTTCCTAAGCAACAGTTTCAGAGTTTAGCTGCAGACGTCAACAGCAGTGTGAACAGTGCTGAGGGTGAAAGCGGCGATGAAGGAGAAAAGAACACTGCAAAACACAAAGACAGTTATGTGGAATCACCAGATGCACCAAGGTTAGAGAAAGTGCGCCACTCCTTGAAGAAGTTGGAGACAAAGAGGAACGAGTATTTGTATGAAAAGCATGTTATTGGCCGTGTGAGCAACAGACGCCGTGACATCGTAAAAGAGCTGGCAAGCATTTCCAGCAGAAAAGTTCCATTCAAGTGGCAACGAGGAAATAAGATTGGTGAAGGCCAGTTTGGAAAAGTGTATGCCTGTGTTAACTTGGATACAGGGGAAGTGATGGCCGTGAAACAGATCAAGTTTCAGCCAAATGATCACGGTGAAATAAAGGATCTTGCTGATGAAATAAAGAACTTTGAAGGTATCAGACATGAAAGCTTGGTCAAGTACTATGGTGTTGAACTTCACAGGGATGAGATGTTTATATTCATGGAATACTGTGCTGAAGGTACCATATCAGATGTGGCTAAGCTTGGTCTTCCAGAATCAATGATCAGGGTGTATACTTACCAGATTCTTGTTGCTGTCAGTGTGCTTCATGAAAAGGGGATTGTTCACAGAGATGTGAAAGGTGCCAACATATTTGTGTCATCTGGCGGTCTGCTCAAGTTGGGTGATTTTGGTTCCTCCATCAAATTAAAGAATCCCCTTCAGACAGTTTATGGAGAAATAAGCAACATACGAGGGACTGTAGCTTACATGGCGCCAGAAGTGATAACGCTGGACAAAGGAGCAGGGTATGGCAGAGCGGCAGATATTTGGAGCATTGGTTGTGTCGTGGTTGAGATGGCAACAGGAAAGCCTCCATGGCCTGATTGTGACAATAACTTCATGATCATGTTCAAAGTTGGCGATGGAGCCACACCTGCCATCCCTGAAACCCTGAGTGAAGAAGGACAAGACTTCTTACTTTGCTGTTTTCTACATGATCCTTATGAGCGGCATACTGCCAATGAGCTGATGGACCACTCGTTTGTCAAGGTAGATTTGTGA

Transcript

PcrG010766.mRNA1

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan
PF19431 all species →	MEKK4_N	MEKK4 N-terminal	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR045801 all species →	Domain	Mitogen-activated protein kinase kinase kinase, N-terminal	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR050538 all species →	Family	Mitogen-activated protein kinase kinase kinase	Interproscan
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48016 all species →	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0000165 all species →	Biological Process	MAPK cascade	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04428	MAP3K4, MEKK4; mitogen-activated protein kinase kinase kinase 4	EC:2.7.11.25	Protein kinases	ko01001	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.