Gene detail

Detailed information of PcrG012341.mRNA1 in Podabacia crustacea

Genomic Location: ptg000449l:171686...172333
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01451 all species →	LMWPc	Low molecular weight phosphotyrosine protein phosphatase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR017867 all species →	Family	Protein-tyrosine phosphatase, low molecular weight	Interproscan
IPR050438 all species →	Family	Low Molecular Weight Phosphotyrosine Protein Phosphatase	Interproscan
IPR023485 all species →	Domain	Phosphotyrosine protein phosphatase I	Interproscan
IPR002115 all species →	Family	Protein-tyrosine phosphatase, low molecular weight, mammalian	Interproscan
IPR036196 all species →	Homologous_superfamily	Phosphotyrosine protein phosphatase I superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11717 all species →	LOW MOLECULAR WEIGHT PROTEIN TYROSINE PHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004725 all species →	Molecular Function	protein tyrosine phosphatase activity	Interproscan
GO:0006470 all species →	Biological Process	protein dephosphorylation	Interproscan
GO:0003993 all species →	Molecular Function	acid phosphatase activity	Interproscan
GO:0004726 all species →	Molecular Function	non-membrane spanning protein tyrosine phosphatase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14394	ACP1; low molecular weight phosphotyrosine protein phosphatase	EC:3.1.3.2 EC:3.1.3.48	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.