Genomic Location: ptg000451l:3360386...3365322
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families
| CDS |
| PcrG012545.mRNA1 |
| Transcript |
| PcrG012545.mRNA1 |
| Protein |
| PcrG012545.mRNA1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00077 all species → | RVP | Retroviral aspartyl protease | Domain | Interproscan |
| PF17921 all species → | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF00078 all species → | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF17919 all species → | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050951 all species → | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR018061 all species → | Domain | Retropepsins | Interproscan |
| IPR041588 all species → | Domain | Integrase zinc-binding domain | Interproscan |
| IPR021109 all species → | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR000477 all species → | Domain | Reverse transcriptase domain | Interproscan |
| IPR041577 all species → | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 all species → | PROTEIN CBG26694 | Interproscan |
PcrG012545.mRNA1. This gene does have a gene model — the search simply returned no hit.PcrG012545.mRNA1.
