Detailed information of PcrG013191.mRNA1 in Podabacia crustacea

Genomic Location: ptg000489l:1760349...1775838
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13898
all species →		MINDY-3_4_CDDeubiquitinating enzyme MINDY-3/4, conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006594
all species →		Conserved_siteLIS1 homology motifInterproscan
IPR039785
all species →		FamilyDeubiquitinating enzyme MINDY-3/4Interproscan
IPR025257
all species →		DomainDeubiquitinating enzyme MINDY-3/4, conserved domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12473
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0071108
all species →		Biological Processprotein K48-linked deubiquitinationInterproscan
GO:1990380
all species →		Molecular FunctionK48-linked deubiquitinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22647MINDY3_4; ubiquitin carboxyl-terminal hydrolase MINDY-3/4EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP