Detailed information of PcrG013340.mRNA1 in Podabacia crustacea

Genomic Location: ptg000497l:1457234...1467813
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02207
all species →		zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040204
all species →		FamilyE3 ubiquitin-protein ligase UBR7Interproscan
IPR003126
all species →		DomainZinc finger, UBR-typeInterproscan
IPR047506
all species →		DomainE3 ubiquitin-protein ligase UBR7-like, UBR-boxInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR011011
all species →		Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13513
all species →		E3 UBIQUITIN-PROTEIN LIGASE UBR7Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0061630
all species →		Molecular Functionubiquitin protein ligase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11979UBR7; E3 ubiquitin-protein ligase UBR7EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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