Gene detail

Detailed information of PcrG013963.mRNA1 in Podabacia crustacea

Genomic Location: ptg000540l:360156...370044
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005419 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00288 all species →	GHMP_kinases_N	GHMP kinases N terminal domain	Family	Interproscan
PF10509 all species →	GalKase_gal_bdg	Galactokinase galactose-binding signature	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006206 all species →	Family	Mevalonate/galactokinase	Interproscan
IPR006203 all species →	Conserved_site	GHMP kinase, ATP-binding, conserved site	Interproscan
IPR020568 all species →	Homologous_superfamily	Ribosomal protein uS5 domain 2-type superfamily	Interproscan
IPR019741 all species →	Conserved_site	Galactokinase, conserved site	Interproscan
IPR000705 all species →	Family	Galactokinase	Interproscan
IPR006204 all species →	Domain	GHMP kinase N-terminal domain	Interproscan
IPR014721 all species →	Homologous_superfamily	Small ribosomal subunit protein uS5 domain 2-type fold, subgroup	Interproscan
IPR019539 all species →	Domain	Galactokinase, N-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10457 all species →	MEVALONATE KINASE/GALACTOKINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004335 all species →	Molecular Function	galactokinase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006012 all species →	Biological Process	galactose metabolic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016301 all species →	Molecular Function	kinase activity	Interproscan
GO:0016773 all species →	Molecular Function	phosphotransferase activity, alcohol group as acceptor	Interproscan
GO:0046835 all species →	Biological Process	carbohydrate phosphorylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG013963.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.