Gene detail

Detailed information of PcrG016783.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_104:2541411...2545860
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01997 all species →	Translin	Translin family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036081 all species →	Homologous_superfamily	Translin superfamily	Interproscan
IPR016068 all species →	Homologous_superfamily	Translin, N-terminal	Interproscan
IPR002848 all species →	Family	Translin family	Interproscan
IPR033956 all species →	Family	Translin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10741 all species →	TRANSLIN AND TRANSLIN ASSOCIATED PROTEIN X	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043565 all species →	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0003697 all species →	Molecular Function	single-stranded DNA binding	Interproscan
GO:0016070 all species →	Biological Process	RNA metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG016783.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.