Detailed information of PcrG016825.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_106:262602...271508
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005663 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12799
all species →
LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF00560
all species →
LRR_1Leucine Rich RepeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591
all species →
RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR032675
all species →
Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR025875
all species →
RepeatLeucine rich repeat 4Interproscan
IPR001611
all species →
RepeatLeucine-rich repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22710
all species →
X-RAY RADIATION RESISTANCE ASSOCIATED PROTEIN 1 XRRA1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG016825.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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