Detailed information of PcrG018917.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_21:81194...82624
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00487
all species →		FA_desaturaseFatty acid desaturaseDomainInterproscan
PF11960
all species →		DUF3474Domain of unknown function (DUF3474)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012171
all species →		FamilyFatty acid desaturaseInterproscan
IPR005804
all species →		DomainFatty acid desaturase domainInterproscan
IPR021863
all species →		DomainFatty acid desaturase, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32100
all species →		OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTICInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006636
all species →		Biological Processunsaturated fatty acid biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0006629
all species →		Biological Processlipid metabolic processInterproscan
GO:0016717
all species →		Molecular Functionoxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of waterInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10256FAD2; omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase)EC:1.14.19.6
EC:1.14.19.22
Lipid biosynthesis proteinsko01004deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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