Gene detail

Detailed information of PcrG019734.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_28:3933029...3958941
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

PcrG019734.mRNA1

ATGGCGGACAGCGAGGGGCTCGATTGCAAAGGTTCTCCAAATGAAACAGACGACAATGAAAACAGCGATGAATTATCAGCTCTTACGAGTGAAGTTGTCAGTGGAGTGGAATCCATTACAAAAACACTTTCAAAGTTGGGAACCAATGAACCCAAGTATAATTGGTTAGATATTACAGAGAACTTCACAGAGTCTGTATCAGAGTTAAAACTGGGTGAGCTTGTCCATGACAACATATTTGGCTTGTTTGAAGCCATGTCAGCAATAGAAATGATGGATCCTAAAATGGATGCAGGAATGTTATGTAACAAAGCTAAAAAAGTTCTTCAATTTGAACCAGCTGTGAAGGCTGACCTAGTGAAAATTAAGGATCTAACTCCTGGAGAACTTATAGGAATCATGGATGAATTGTTAGCTTGCTTGGTGACATGGCTTGATGGTCATTCCTTAGTACAGACAGTATTCACATGTTTGTACATGCACAATCCATTTATCATTGAGGACCCCTGCCTTAAGGCATTCTGTATAGCCATGTTGAAGTCCTGTGATACCATCAAGTCTATTGTAAACAGAGCTCAAGTATTTGAGGAGGAAGATTTTCAAGCTATGACTTACGGATTTAAAATGGCAACTCAAGTTACAGAGACAAGAGCAGCAGGTATGCTTAAAGAGGCAGAAGATGAAGTTGTTCGAAAAGTGAAGCCACTGAAGACAACCCTCAGAGAAGAACCAAACTGTGATATTGAGTTGGTGCAGAGTCAAGTCAAGAGCTATGAAGCTGTTTTAGCCAGATTAAAGTTCTACAAATCATTTTACCTCACTCTTGTTGCCCTTGAAAAGTCAGAGGGCTCAGGTGTACCCACTGCAAAGCAGTTGTTAAACACAGCTCTGACACTCATTGAACCAATAAGAAAGACAGTTGAATTAGGTATACAACCTGTACCAACAGAGGATGATAGACAAGGTAGCGCAATGGGTTTTGAGCCGCTTGTCAATCAAAGGCTGTTACCTCCATCTTTTCCACGGTACACTGCCATCTTTGGTCGAAACCAGGCTATTGATTACACAGAGGGAATGGTCAAACGATTTCTTCACATCTGTGATGTAGTGAACTATGCATCTCTTCACATAATTATCGACTTTATTTCTGAGTTCAGTAAGCAGCGGCCGTGTGTTTTAACACGCTCCTATTTACAGCTCCTTGTGTGGCAGAACAATACACTTCTTGGAAAACCTGAGACAATAAGAGATGCCATCAGAGCATTCAACAGCCCACCATCGATTGCTGAAAAGTCCTCCCTGAGCACTAATCCCAAAGCAAATGACCTTGCTGAAAGCTTTATCAACAAGGCTGCCAGGCCTGTTAAGTCTATAATCCATGCTCTTGGTCACAATCGTGCTCGTCAAAGAGACAAGTTAGCTCACATCTTGGAGGAGTTTGCTGCTCTGCAAGACGAAGCAGACAAGGTAGACGCACAGCTTCATACTATGTTAATAAAGGTGGAACCTCAGCGTCAGCACTTTGCATGTTTTGGTTCTTGGGTGTTGTACCATACTCTGAACATCATGATTCAATATCTGTTATCTGGCTTTGAACTGGAGTTGTACAGTCCACATGAGTATCACTATGTGTTTTGGTACCTGGACTTTTTGTTTGGTTGGCACATGACGTGCCTCAATCGCGCTGAGAAGTTACTGCAGGCTCAAGAAACCGCCTTAGAGCAAAGAAGTGGTAGAAGTGGAAAGAAAAACAAAAAGAAAAAGAAAGCGAGTGAAAAAGCCATTCAGGAACACCAGGGGATGTGGCACTTGTATCAAGGAATGAGACATTTATGTCAAGGATATCTCAGGGCTCTTGAAGGCTTTGAACTGCAAGGCAAGACAAGAAAACCTGCGGATAAGTTTGGATCTGAACAGGTACGTTTTGAGCGGCGTTTCCTGCCATTCCAAGCCGTGGACACGCCACAACCCATGTACTACGCTCATTACAAGGAATACAGTAACATGTCCAAGATGAACGTGTCACAGAGTACAGACTTGTTTGTGATGGCGTCAAATTCCTTTCAGCAGGCGAAATCAATCTTTGAAGTTGTAAACAATGTACATACCGAGGTTGCTTTATTGCTCAAAGTGACAAAGACAAATCTGGTCGTCACCAAACTTGCCGCTGGGGGTCACAAACGCGATTCTAAGAATCCGCCAGCGTTTGACTTCCAATCCCACCGAGCCTTTCCCATCATTAAGCTTAAGTAA

Transcript

PcrG019734.mRNA1

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004461 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04112 all species →	Mak10	Mak10 subunit, NatC N(alpha)-terminal acetyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007244 all species →	Family	-alpha-acetyltransferase 35, NatC auxiliary subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21373 all species →	GLUCOSE REPRESSIBLE PROTEIN MAK10	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006474 all species →	Biological Process	N-terminal protein amino acid acetylation	Interproscan
GO:0017196 all species →	Biological Process	N-terminal peptidyl-methionine acetylation	Interproscan
GO:0031417 all species →	Cellular Component	NatC complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20823	NAA35, MAK10; N-alpha-acetyltransferase 35, NatC auxiliary subunit	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.