Detailed information of PcrG021453.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_39:2008781...2030609
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003496 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00640
all species →		PIDPhosphotyrosine interaction domain (PTB/PID)DomainInterproscan
PF00566
all species →		RabGAP-TBCRab-GTPase-TBC domainFamilyInterproscan
PF11830
all species →		DUF3350Domain of unknown function (DUF3350)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006020
all species →		DomainPTB/PI domainInterproscan
IPR000195
all species →		DomainRab-GAP-TBC domainInterproscan
IPR011993
all species →		Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR050302
all species →		FamilyRab GTPase-activating TBC domain-containing proteinInterproscan
IPR035969
all species →		Homologous_superfamilyRab-GAP-TBC domain superfamilyInterproscan
IPR021785
all species →		DomainDomain of unknown function DUF3350Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47219
all species →		RAB GTPASE-ACTIVATING PROTEIN 1-LIKEInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for PcrG021453.mRNA1 in Podabacia crustacea.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K17902TBC1D4, AS160; TBC1 domain family member 4-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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