Detailed information of PcrG022192.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_45:827885...861098
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028
all species →		CadherinCadherin domainDomainInterproscan
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF02210
all species →		Laminin_G_2Laminin G domainDomainInterproscan
PF01049
all species →		CADH_Y-type_LIRCadherin, Y-type LIR-motifFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR020894
all species →		Conserved_siteCadherin conserved siteInterproscan
IPR002126
all species →		DomainCadherin-likeInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR015919
all species →		Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001791
all species →		DomainLaminin G domainInterproscan
IPR027397
all species →		Homologous_superfamilyCatenin binding domain superfamilyInterproscan
IPR000233
all species →		DomainCadherin, Y-type LIR-motifInterproscan
IPR050174
all species →		FamilyProtocadherin/Cadherin-related Cell AdhesionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24028
all species →		CADHERIN-87AInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan
GO:0007155
all species →		Biological Processcell adhesionInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →		Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG022192.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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