Detailed information of PcrG023719.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_59:4322878...4324937
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16573
all species →		CLP1_NN-terminal beta-sandwich domain of polyadenylation factorFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038239
all species →		Homologous_superfamilyClp1, N-terminal beta-sandwich domain superfamilyInterproscan
IPR045116
all species →		FamilyPolyribonucleotide 5-hydroxyl-kinase Clp1/Grc3Interproscan
IPR032324
all species →		DomainClp1, N-terminal beta-sandwich domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12755
all species →		CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1PInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006378
all species →		Biological Processobsolete mRNA polyadenylationInterproscan
GO:0006388
all species →		Biological ProcesstRNA splicing, via endonucleolytic cleavage and ligationInterproscan
GO:0006396
all species →		Biological ProcessRNA processingInterproscan
GO:0051731
all species →		Molecular Functionpolynucleotide 5'-hydroxyl-kinase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG023719.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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