Gene detail

Detailed information of PcrG024294.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_64:1608254...1648057
NR annotation: no NCBI-NR hit recorded
Species abbreviation PCRUS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

PcrG024294.mRNA1

ATGCTCGTGCTGTTTAGCACACTGTGGCTCGCCTGTGCTGTTCTCAGAGGCCAAGCCATCAGTTGCTGTCGAAATGCTGCTAAATTCAATGCTTGCAAACATCGGTGTAATGAGTTGGAGTCCGAAACAGACGTAAGTTTACGGTATCAAAAGCTACGCGACCTTCCCAAACACTGCCCGGGCCATTTGATTTCTTTTTGGCGCTGCCTTAATGCTTCAAATCCAGTAATCAGTCCCTATATTGGAACAAATCCATCCAACTATGGCAGGACCTGTTGTCTTCTTCCTTCTTCATTTAAATGCCGCAAAGCATGTCGCGAAGGAAAAACAGAAAATTTGAGGAAAAACTGCTCAGAAGTGGAAGAGAGTGCAATGTTTCGATGTCTAGGCAGACACCAAGCATCCAAAAATTGCTGTAAGAATGATCGCTGGACAACTTCAGAGTGTATCCAGTCCTGCCAAGTGGTGTTTTCATCGGAAGAAGTGCCGTCAATCCAGGTGAAGAATGATGTGCGGAGGTATTGCTCAGGAAACTCACACGTGGTTTCTTGCGTGGACAAGCTGACTGCTGATGTGAAATCATGTACTGCACAAGCAATGGATTCAAAACGTAAAGCATTGAGGTGTTGTAGAAAACTGAAGGCTGATGATTCAAAATGTAGAAGAACTTGCCGACAGGATCTTCAGTCACAGAAAAGTGCAACAGCCCTGATTTCAAATCTCGTCATTGCTTGTGGAAATCCATTTGCACATAACAATACACAGCGTGATGATTTTTGGACATGTCTTCTGGCCAGTGCAGATGACAAGCCTTCTTCAGTTTGTCCAACAGAGATACCAACACCTCCATTACCAGATTCAGGAATTGATGGTGCACGGCTCCAGTGCTGCTCAAAAGCTACTGAATCTTCTTGCTGGCGTCTGTGTGTCCAGATGTACACATCCAAGTGGGGCAAGACTCAGAACTGGCGAGCTTTTGACAGCCAATGTTCATACAATCCCAAAGAGATCAGTATGATGAACTGTTTAGCTGATGTGACTGAACCTTGTCAGTTAGGATGCTCTGGCCTCAGTTTCTGCACTAACTTCAACAACAGACACACTGAGCTGTTCCGTAGCTGTAACAGTAAGTCAGACTATGAAGCCAAGAATCACATGCAGGAGTGGAAAAAAGGCTTTATTAAAATGCCGAACATTGTGATACCAATTCAGGACATCAAGAAGTGCCTCCCTGATACATGGAAGGCCATCGCTTGTGTTCTCCAGATTAAGCCGTGCAGTATCAAATCTCATCGGAGCACCATCTGTAGACCTGACTGTGTTCAAATTCTAGAGAAGTGTCGTAATTCAAGTGCCCATTTGGCATCATTATCAGCGGAACAAGTTTGTGCTGAACTCTCGCCTCCTGATAAGCAGGCTCCCTGTATTTCCCTCAAGGAATATCTTGTACCCAGCAAGTATACTGATGTCACAGATGAAGTGACTCACCCATGCAATCCAAACCCATGCAAGGAGAATCAAGTGTGTGACATCAACAGAAGTTGCTATGGAGCCCTACTTGACAGGTGTCAATCATACACTTGTGTGCCAGGATGTCCACTTGGTGATGCTTCAAGCTTTCTTGTGAGAGTAGGAGAGTATGCAAGGGTACCGGTTGCAACTGGAAGAGAAGGCTGTTTCAGGATCTGCCACTGTGATGGCACATCCAGACTGAGCAACTGTGTTAACCTGGAATGCGTTCAACGACAGCCGTGCTCACTAAGAGATAAACTCATAAAAGATGGCGAAATGTTTATGGATGGCTGCAATATGTGCACGTGTTTTTCGGGGGAGCTAACATGCACAAGGAAGCATTGTCTAGAGCCTGTATTTTCACCAGAATACAATGCAAGCCGGCCGAAGCGCAATCAGACACCAGACAAAGAATCTGTGGATACTGACGTGATCACAACTCTGCCCTGTGCCTGTGAGAATGTTTATCATCCAGTGTGCGGAAGTGATGCCAAGACCTACCCTAATCCGTGCGTGGCTCGCTGTATTGGAGTGATCCTGTCTAAGGAAGGCAATTGTGCTTCCATTGATCCGTGCGAGCCAAACCCTTGTGCACCTGACGAAAAGTGTATTGTTGAAAGGAAAACATGTCTCTCTATTGCTGATCCCTGTAGCCAATATTATTGTGTCTCAGAAGGAAAATACTGCAGTGATCTTCAGTTGGATCCAGTCTGCGACTCGGAAAACAATCAGCACCCAAACCTCTGCTCGTTGCAGTTCAACCGCAAGAGCCTGGGGTACAGAGGTTTCTGCAAGGATGAATGCAAACCACCCTCTCCTCCTGTGTGCGGGGTGAATGGAGAGACGTACTCCAGCACATGCGCAGCTCACTCAGCGAGAGTCATCGTTGATTATCAAGGACAGTGTAAGGCTGTTGGAAGCGGAGATGAAGATGAACCAAGGTGTGAGAATGTCACGTGTCCACCATTAAAACCGTCTCACTGCAAAGGAACTATCCCACCAGGGGCTTGCTGTCCACACTGCGCCGCGGAGGTTCGATTTTTGTACATTTTAAAACAACTGAGGACGAACAGAGAGGGTTTCAGCAGGCATGAGTCCGTCACACTTGAGGAAGTGTTCCGGGTTCTCCGCCGGCACATCTCAACTGTAAGTACTTCATAA

Transcript

PcrG024294.mRNA1

GCGATCGAATTCGCTCAACACGAGGCTCTTTGTTACTCTTCGCAACTAAAATTGATTGGAAAGTGCTCGAGAGAGTCCATGCAGTTCTTGATTCGTTCCCGTCAAGATGCTCGTGCTGTTTAGCACACTGTGGCTCGCCTGTGCTGTTCTCAGAGGCCAAGCCATCAGTTGCTGTCGAAATGCTGCTAAATTCAATGCTTGCAAACATCGGTGTAATGAGTTGGAGTCCGAAACAGACGTAAGTTTACGGTATCAAAAGCTACGCGACCTTCCCAAACACTGCCCGGGCCATTTGATTTCTTTTTGGCGCTGCCTTAATGCTTCAAATCCAGTAATCAGTCCCTATATTGGAACAAATCCATCCAACTATGGCAGGACCTGTTGTCTTCTTCCTTCTTCATTTAAATGCCGCAAAGCATGTCGCGAAGGAAAAACAGAAAATTTGAGGAAAAACTGCTCAGAAGTGGAAGAGAGTGCAATGTTTCGATGTCTAGGCAGACACCAAGCATCCAAAAATTGCTGTAAGAATGATCGCTGGACAACTTCAGAGTGTATCCAGTCCTGCCAAGTGGTGTTTTCATCGGAAGAAGTGCCGTCAATCCAGGTGAAGAATGATGTGCGGAGGTATTGCTCAGGAAACTCACACGTGGTTTCTTGCGTGGACAAGCTGACTGCTGATGTGAAATCATGTACTGCACAAGCAATGGATTCAAAACGTAAAGCATTGAGGTGTTGTAGAAAACTGAAGGCTGATGATTCAAAATGTAGAAGAACTTGCCGACAGGATCTTCAGTCACAGAAAAGTGCAACAGCCCTGATTTCAAATCTCGTCATTGCTTGTGGAAATCCATTTGCACATAACAATACACAGCGTGATGATTTTTGGACATGTCTTCTGGCCAGTGCAGATGACAAGCCTTCTTCAGTTTGTCCAACAGAGATACCAACACCTCCATTACCAGATTCAGGAATTGATGGTGCACGGCTCCAGTGCTGCTCAAAAGCTACTGAATCTTCTTGCTGGCGTCTGTGTGTCCAGATGTACACATCCAAGTGGGGCAAGACTCAGAACTGGCGAGCTTTTGACAGCCAATGTTCATACAATCCCAAAGAGATCAGTATGATGAACTGTTTAGCTGATGTGACTGAACCTTGTCAGTTAGGATGCTCTGGCCTCAGTTTCTGCACTAACTTCAACAACAGACACACTGAGCTGTTCCGTAGCTGTAACAGTAAGTCAGACTATGAAGCCAAGAATCACATGCAGGAGTGGAAAAAAGGCTTTATTAAAATGCCGAACATTGTGATACCAATTCAGGACATCAAGAAGTGCCTCCCTGATACATGGAAGGCCATCGCTTGTGTTCTCCAGATTAAGCCGTGCAGTATCAAATCTCATCGGAGCACCATCTGTAGACCTGACTGTGTTCAAATTCTAGAGAAGTGTCGTAATTCAAGTGCCCATTTGGCATCATTATCAGCGGAACAAGTTTGTGCTGAACTCTCGCCTCCTGATAAGCAGGCTCCCTGTATTTCCCTCAAGGAATATCTTGTACCCAGCAAGTATACTGATGTCACAGATGAAGTGACTCACCCATGCAATCCAAACCCATGCAAGGAGAATCAAGTGTGTGACATCAACAGAAGTTGCTATGGAGCCCTACTTGACAGGTGTCAATCATACACTTGTGTGCCAGGATGTCCACTTGGTGATGCTTCAAGCTTTCTTGTGAGAGTAGGAGAGTATGCAAGGGTACCGGTTGCAACTGGAAGAGAAGGCTGTTTCAGGATCTGCCACTGTGATGGCACATCCAGACTGAGCAACTGTGTTAACCTGGAATGCGTTCAACGACAGCCGTGCTCACTAAGAGATAAACTCATAAAAGATGGCGAAATGTTTATGGATGGCTGCAATATGTGCACGTGTTTTTCGGGGGAGCTAACATGCACAAGGAAGCATTGTCTAGAGCCTGTATTTTCACCAGAATACAATGCAAGCCGGCCGAAGCGCAATCAGACACCAGACAAAGAATCTGTGGATACTGACGTGATCACAACTCTGCCCTGTGCCTGTGAGAATGTTTATCATCCAGTGTGCGGAAGTGATGCCAAGACCTACCCTAATCCGTGCGTGGCTCGCTGTATTGGAGTGATCCTGTCTAAGGAAGGCAATTGTGCTTCCATTGATCCGTGCGAGCCAAACCCTTGTGCACCTGACGAAAAGTGTATTGTTGAAAGGAAAACATGTCTCTCTATTGCTGATCCCTGTAGCCAATATTATTGTGTCTCAGAAGGAAAATACTGCAGTGATCTTCAGTTGGATCCAGTCTGCGACTCGGAAAACAATCAGCACCCAAACCTCTGCTCGTTGCAGTTCAACCGCAAGAGCCTGGGGTACAGAGGTTTCTGCAAGGATGAATGCAAACCACCCTCTCCTCCTGTGTGCGGGGTGAATGGAGAGACGTACTCCAGCACATGCGCAGCTCACTCAGCGAGAGTCATCGTTGATTATCAAGGACAGTGTAAGGCTGTTGGAAGCGGAGATGAAGATGAACCAAGGTGTGAGAATGTCACGTGTCCACCATTAAAACCGTCTCACTGCAAAGGAACTATCCCACCAGGGGCTTGCTGTCCACACTGCGCCGCGGAGGTTCGATTTTTGTACATTTTAAAACAACTGAGGACGAACAGAGAGGGTTTCAGCAGGCATGAGTCCGTCACACTTGAGGAAGTGTTCCGGGTTCTCCGCCGGCACATCTCAACTGTAAGTACTTCATAACTATATTGTGGACATAGAAGTCAGAATTCGTGTTCCGTGAAATGGCCGAAAATGAACTGTTATTACATGCACTCAAAATGTTTTCGTTCAAGCATTACAAAAATTGTCACGGGAACCTTTAGTTCTGATAGTGCAGGCTTGGTCAGTTGTTGCAAGAGGTTTGTTAACACGTGCGTCAGGCCTGTACGCGCATAGAGTAGAGTCGCTCCGTCACGCGTGCAGTAGGAGCGATTACACACCTGGGCTAGGGATCTCTTTTTTTATCGGAACTGGAACAAACAGTGAAAGAAAAGTCTGTGGCACTTCTTGCCCAGGATAGAGCTCTTGACGGATAAAGATAATGACGCTGTCGGCTAGTTAACTTATACCAGGACGATTAAAATAAAAACAAAAGACTGTTTAAGAGTCGATGTATTTATCACTGCTATGCTGATTGTAAGTCAATGTTTTCTTTTTTCCAGACGGAGTGTGATTTGTTCGGATACCACAGTCTTGAGCGTGACATAGTTGTGTTGGTGATGGCTGTCACACCAAGGCCGACAAAACTTCAGGTGGAAGCGTGTAATCGTGAAGCTCAAAAGATTGAAGCTTTTATAAACACGGGAACTCCATCCTTCACAACAGACATTGTGCTATCAGCACTCAAAGGCGCACGCTCGCGCGTGCCTTCCTTATCAAGTAAACCGGAAAAACCGGTTTCCCCTCCTCGCAGCAGTAAAGGGAGTCAGGTGAACAACGCACTTATCGCCACATTACTTCCCATCGTAATATTACCAGTTATGCTCCGAACAGGCAGAAGCTAACAATTAATGTTACAAAGAGTAATATTTTTATGTCCTTGTAATGAAATTATGAATGTATAGAGATAAATTATTGTATTTTTCGAGGAAAAATTTTGAAAGACAAGAAGAGGTGGAAAAAGTTGTTTTCGCGCGAACTCTGCAGTGAGGTGTACCGTACCACTGTTCATCGATACGTGTGTGATTGAAGTTTGACGCCTTTTTGATGGTATCCCCGTGGATTGGCCATTCAGAAAACGTCTTGCTAATCATTCGGAAAGCCAACAGAAACTTGTTAAATTGGTACGTAGGGTTCGTTTCACTGCAGTAACTGTTGTGGACCAGATCAGTGTCAGCGTCATTTAAGGGTCGTCACGCAACGCTCCACTCCAAGCGTTGAGTGACTTTTCATAAAATGGCTGGGAAGTTGAAGGTGTACATCTAAGGAACTGTACCAGTTGGGACTGATTTCAGTCGCCTCTTATGCTCAGTTAAATCGTGTGGAGGTGGCTGAAATTCGAGCTACCACTGGCATCGTTTTTATATGAACAGGCCGTGCAGAAAGGAACCAAGTTTCTTTACAATATATATATTTTAATATAACTTAAACACTCAGGACCTACGTTTTTATTAGTGCATTTTCCTACTGATCAAAACACGGTATTTGCAATCTTCAGGTTTCATTTCAGGAGAGAGGCTTGTAAAGTTAGCCCGCATAACTGACGGTTCTGGGGAAAATTGCAAACCAAAAATAATAACTGTTTTCTTTTCTTCGCTTTCCTTAATTTGTGACTCTACAAAACCGTCATTTATTTGGCCTTAGAAAGATTTTCAGCAATATTAAATGAGACAAAAAGTTTTCTGAAAGAAACATTGACAGTTCTCACAAAACAGCTAAATTTGTAAGTCTCCTGTTTTGAAACCGGTTGTGTCCAATTTTGTTTTTATAAAAAACACATCAGATTACTACAAATGGTAATATATAAAATTCTTAGGTTTGGAGGAGTTCTAATTAAAAAAAAATGTTCGAAGATTTGATAGTTTCTATAGAGTTATGCATCATGAAATGAACTGTATTAACTCCTTTAAAAAACTTCGTTGCGTTTTTGTTAATTGTTTATCCTCAATTAAGACCTAATGATTTGATTCTCGACTGGGTCACGCAAGCTTCAGTTGTGTGACGTTTGCGTGACAGGTCCGAGAACCAAACCGTTTTGTTACTGTTCCAGTTTATCTCAAGCACGTTCACTCAAAATATTCGATTAATAT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07648 all species →	Kazal_2	Kazal-type serine protease inhibitor domain	Domain	Interproscan
PF05375 all species →	Pacifastin_I	Pacifastin inhibitor (LCMII)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002350 all species →	Domain	Kazal domain	Interproscan
IPR039016 all species →	Family	Reversion-inducing cysteine-rich protein with Kazal motifs	Interproscan
IPR008037 all species →	Domain	Pacifastin domain	Interproscan
IPR036058 all species →	Homologous_superfamily	Kazal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13487 all species →	SERINE PROTEASE INHIBITOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0004866 all species →	Molecular Function	endopeptidase inhibitor activity	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0008191 all species →	Molecular Function	metalloendopeptidase inhibitor activity	Interproscan
GO:0030198 all species →	Biological Process	extracellular matrix organization	Interproscan
GO:1904684 all species →	Biological Process	negative regulation of metalloendopeptidase activity	Interproscan
GO:0030414 all species →	Molecular Function	peptidase inhibitor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG024294.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.