Gene detail

Detailed information of PcrG024583.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_66:1624062...1628826
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

PcrG024583.mRNA1

TTACATCGGAAGCTCACTGTACAATATCCAACCTTTGTACCACTTGTAGCCTGAAGTCTTTTTACGTCAAAGTTTGGTATAAATTACTCATAAAACTAGCGTAGCGTCCACTATAAATCAGCTAAACTCATCTAGAATATCGTCAAGTGTCTCAGGATGAATCGTTCATTGTATCCAGCCTCGTGTCCACCGATTGTACACGTTCCCACTTGTATAGTGATGGTAGGTTTGCCGGCGAGGGGCAAAACGTATGTCTCCAGAAAGCTTGCCCGCTACCTCAACTGGATTGGAGTGAACACAAAGGTATTTAACCTTGGTGAGTATCGTCGTGAAATGGCTGGGGCTCATTGCAAGCACTCCTTCTTCGATCCATCCAACGCAAACGGAATGAACGTCCGCGAGAAGTGCGCCGAACTCGCTCTTGAAGACATCACAAAATGGTTGAACGACAAGGGTCAGGTTGCCATCTTTGACGCCACAAACACCACTCGCGCCAGGAGAAAGAAAGTCAGGGATCACCTTGCCGCCCAAGGCTTCAAGGAGTTCTTTGTCGAGTCAGTTTGCGACGACATTGAGATAATCCGTTCTAACATATTAGAGGTGAAGGTCAACTCTCCAGACTATCAGGGGGTCCCCCCAGAGGAGGCCCGTGAAGATTTCGAAGCCCGGATTAGCCATTATAACAATTTTTATGAATCCATTTCTTTGGAACATGATTTTGATATGCCCTTTTTGAAAGTGATTGATGGTGGCAAGAGGTTCTTAATGAACAAAGTGGAAGGATACCTGCAAAGTAGAATAGTGTATTACATAATGAATCTTCACATCACCCCTAGAGCCATTTATCTGTCAAGACATGGTGAAAGCATGATGAATTTACAAGGGAGGATCGGCGGCGACTCTGATCTCTCTCAGAGGGGATGGGAGTACAGTAAAGTTCTAGCAAAGTTCGTCCAAGATAACATGCCTGCCGACCTCAAAGTCTGGACCAGCGAAATGAAACGAACCAATCAAACAGCCAAGTACATTGAGAGACCAATCGAAAAGTGGAAGGCCGTTAATGAAATTGATGCTGGAGTATGCGAGGGGATGACATATGAAGAAATACAAGAGCAATTTCCAGATGACTTTGCTAGAAGGGATGAGGATAAATTTCACTACCGTTATTCTCGCGGGGAGTCTTATGAGGACCTTGTTGCCCGCTTGGAACCAGTCATCATGGAACTGGAAAGGCAGCACAATGTACTCGTCATCTGTCACCAAGCAGTGGCTCGCTGTCTCCTAGCGTACTTCCTCGACCACAACTCTGAAGAGCTGCCATATCTGCGTGTTCCGCTACACACTGTTGTCAAGCTCACTCCAGTGGCATATGGGTGTCGTGTGGAAAAGTTTGACCTGAAAATTCCTGCTGTAAACACACACAGAGAAAAGCCCAAAAATGTTTCAGCTAGCAGGTCTTCTGATGATGCATTGGAAACTGTTCCAGATCATGAATGATGATTTGAAGAATTATTTTTCTTCTCACACAGGGGTACGGCAGGCTGTTCCATTACCTTTTTTCTAGTCCATAGAAGATCAAAAGAAAGCAGACTGTAAAAGAATGGATCTTTTTAACTTGTACACCCAGCAAATTAGttggttgaataataaaataattatcctatttaatcttgcaaaatatcatctgattttaggcaactctgcatacggccttgatgcctatgtgtcaggcaatattctgcacaatgtcacaggataCCCAAAAACAGTtacagtgtgactacttcaagcaacgccacccaacaaatattttgcaaaatgacaaacaaaaatacggggtgttaacaaaaatttctgacaaataagcaatctaagcaatttacactctacataataaatacatttgggataatttttattttttcaacactctaatgctactggtaaatttgcaaagaatttgtttgggtgacattggttagagtagttgcaatgtaatctgccatacgcgaaaagattgcgccacgcgctgcattctgggtagatcaacatattggtctaaaatttacattgttgcctgcaagttggcgggaaaaaattatagacaaatgtatggagaattaaggcacgactgaatgtttcctagaacagctgcatccctcaaatttggtcaatacaatctttcatctggtatcttaactctgctgttcatgaattgttcaggatttattttcttaggaaattgtttaccgtcaaattcccatacaaacacagtaaatttggggccaacgtgtcaatctacccagaatgcaacacgtggcgccatctttttgcgtattgtggattGTAAAGCGCTATTGATCAGAATATGTAAATAGCACTGTAAAAG

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00300 all species →	His_Phos_1	Histidine phosphatase superfamily (branch 1)	Domain	Interproscan
PF01591 all species →	6PF2K	6-phosphofructo-2-kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013078 all species →	Family	Histidine phosphatase superfamily, clade-1	Interproscan
IPR003094 all species →	Family	Fructose-2,6-bisphosphatase	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR029033 all species →	Homologous_superfamily	Histidine phosphatase superfamily	Interproscan
IPR013079 all species →	Domain	6-phosphofructo-2-kinase	Interproscan
IPR001345 all species →	Active_site	Phosphoglycerate/bisphosphoglycerate mutase, active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10606 all species →	6-PHOSPHOFRUCTO-2-KINASE/FRUCTOSE-2,6-BISPHOSPHATASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006003 all species →	Biological Process	fructose 2,6-bisphosphate metabolic process	Interproscan
GO:0003873 all species →	Molecular Function	6-phosphofructo-2-kinase activity	Interproscan
GO:0004331 all species →	Molecular Function	fructose-2,6-bisphosphate 2-phosphatase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0006000 all species →	Biological Process	fructose metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for PcrG024583.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.