Detailed information of PcrG025787.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_7:4590118...4608346
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004767 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01846
all species →		FFFF domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036517
all species →		Homologous_superfamilyFF domain superfamilyInterproscan
IPR039726
all species →		FamilyPre-mRNA-processing factor Prp40Interproscan
IPR002713
all species →		DomainFF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11864
all species →		PRE-MRNA-PROCESSING PROTEIN PRP40Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000398
all species →		Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0003723
all species →		Molecular FunctionRNA bindingInterproscan
GO:0005685
all species →		Cellular ComponentU1 snRNPInterproscan
GO:0045292
all species →		Biological ProcessmRNA cis splicing, via spliceosomeInterproscan
GO:0071004
all species →		Cellular ComponentU2-type prespliceosomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for PcrG025787.mRNA1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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