Detailed information of PcrG026217.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_73:966776...991012
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00977
all species →		His_biosynthHistidine biosynthesis proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011858
all species →		FamilyHis6-like, eukaryotic-typeInterproscan
IPR044524
all species →		FamilyHistidine biosynthesis, HisA-likeInterproscan
IPR013785
all species →		Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR006062
all species →		FamilyHistidine biosynthesis proteinInterproscan
IPR011060
all species →		Homologous_superfamilyRibulose-phosphate binding barrelInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43090
all species →		1-(5-PHOSPHORIBOSYL)-5-[(5-PHOSPHORIBOSYLAMINO)METHYLIDENEAMINO] IMIDAZOLE-4-CARBOXAMIDE ISOMERASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000105
all species →		Biological ProcessL-histidine biosynthetic processInterproscan
GO:0003949
all species →		Molecular Function1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activityInterproscan
GO:0000162
all species →		Biological Processtryptophan biosynthetic processInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01814hisA; phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomeraseEC:5.3.1.16
Histidine metabolismko00340deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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