Gene detail

Detailed information of PcrG026330.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_74:271351...297774
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

PcrG026330.mRNA1

tcgcgacttgcactttttatgccggttagttctcaagaattgttttggtaacttgatatatcagaagaactctgcagtctcacttcgattaactttgctaaagtgaaatctgtagggaagggaatggaccggccaagcacaaacttgtgcgaaggacgagtttttgaaagctatcgtagtcattttgtacggaacagtacaagcttggcacaaaACTAACAGAGCTTTGGGACTATCCAAAGTATGGCTGCCCATTTAAAAGGGGATCAAAGTACTTCTACTTTCACAACTCTGGGCTACAAAATCAAAGTGTCATGTATGTTCAAGACTTGCTGGACAGTGAGCCTCAAGTATTTCTTGATCCTAATAAGCTGTCTGATGATGGCACTGTGGCATTGGTGGGAAGATCTTTCTCTGAAGATGGAGAGCTCTTTGCTTATTCCTTGTCAAACAAAGGCTCTGATTGGGTCACCATTAAGTTCATGAAGGTGGATGGCAGGGAGAAATTGCCCGACTCACTGGAGAATGCAAAGTTTACCAGCATGGCTTGGACACACGACAATAAAGGGTTGTTTTATAATCAATATCCTACTAATTCCAAAGCAGATGGAACAGAAACTGACCTGAACCTCAATCAAAAGCTTTATTACCATGTACTTGGAACAAACCAATCAGAAGATGTTCTTTGTTGTGAGTTTCCTGAACATCCCAAGTGGTCTATGGGTGCTGAAGTTAGTGACTGTGGACGTTATTTGATTTTAACTCCTCATGAAGGCTGTGCCCCCATGAATAGACTTTTTTACTGTGATCTTGAAAACCACAGGAAGGGAATAACTGGTTTACTGCCCTTTGAGAAGGTGGTGGACAACTTTGATGCTGAATATGAGTACATCACCAATGAGGGAACACTCTTCACTTTCAAGACCAATTTAAAAGCTCCAAAATACAAGCTAATCAATATTGACTTTTCAAAACCCGAAATGGAACACTGGAGCACTTTGGTAGAAGAAGATGAAAAAGATGTTTTAGAGTGGGTGGCCTGTGTCAAACAGAACTTGTTGGTTCTGTGTTATCTTCATGATGTCAAGAGTGTGCTTCATCTTCACAATCTGACAGGAGAGAGGCTCATGACATTTCCTCTTGATATTGGCAGTGTCGTTGGCTATTCTGGGCGAAAGAAGGATTCAGAGATCTTTTACCAGTTTACGTCATTTCTCACTCCAGGAATCATCTATCACTGTGATTTAACTCAGGAGAATTTTCAACCCAAGGTTTTCCGCGAAACAAACGTCAAAGGATTTGATTCCACTCAGTTCCAAACTGTACAAGTATTTTATCCCAGTAAAGATGGAACCAAGATTCCAATGTTTATTGTCCACAAACAgGGTATTGCACTAGATGGTAGCCATCCATTGTACTTGTATGGTTATGGTGGATTTAACATCTCCATCACTCCAGCTTTCAGTGTATCACGAGTCATGTTCATGAGGCATCTTGGTGGGATCATCGCTGTACCGAACTTGAGGGGTGGAGGTGAATACGGTGAAACATGGCACCAAGCAGGCTGCTTTGGTAATAAACAGAATGTGTTTGATGACTTTCAATATGCGGCGATATACCTAACCCAGCAGAAATACACATCACCAGAAAAAATAACTATCTGTGGTGGATCTAATGGCGGCCTATTGGTGGGTGCTTGCATCAATCAACGACCAGAACTGTTTGGATGCGCTGTGTCTCAAGTCCCAGTTATGGACATGCTAAAGTTTCATAAATTTACCATCGGTCATGCATGGACAACAGATTATGGATCCCCTGATAAGAAAGAAGATTTCGAATGGCTGATTAAATATTCACCTCTCCACAACATCAAGATCCCCGAAAATGGCGCCCAGTATCCGTCGCTTTTGCTGTTGACCGCTGACCACGATGATCGTGTAGTCCCACTGCATTCTCTAAAATACATTGCGCAGTTGCAACATTGCGTTGGCAGTCGTGAAAAACAGACAAACCCACTTCTAATCAGAATTGACACAAAAGCTGGACATGGATTCGGAAAGCCTACAGCCAAGATAATTGAAGAATATTCCGATATATACGCCTTCATCGCACGAAATCTTAACCTTCCCTGGCAAGACTGA

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00326 all species →	Peptidase_S9	Prolyl oligopeptidase family	Domain	Interproscan
PF02897 all species →	Peptidase_S9_N	Prolyl oligopeptidase, N-terminal beta-propeller domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001375 all species →	Domain	Peptidase S9, prolyl oligopeptidase, catalytic domain	Interproscan
IPR029058 all species →	Homologous_superfamily	Alpha/Beta hydrolase fold	Interproscan
IPR002471 all species →	Active_site	Peptidase S9, serine active site	Interproscan
IPR002470 all species →	Family	Peptidase S9A, prolyl oligopeptidase	Interproscan
IPR023302 all species →	Domain	Peptidase S9A, N-terminal domain	Interproscan
IPR051167 all species →	Family	Prolyl oligopeptidase and macrocyclase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42881 all species →	PROLYL ENDOPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008236 all species →	Molecular Function	serine-type peptidase activity	Interproscan
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0070012 all species →	Molecular Function	oligopeptidase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01322	PREP; prolyl oligopeptidase	EC:3.4.21.26	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.