Detailed information of PcrG027009.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_79:6801780...6834473
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16909
all species →		VPS13_DH-likeVacuolar-sorting-associated 13 protein, DH-like domainFamilyInterproscan
PF12624
all species →		Chorein_NVPS13-like, N-terminalDomainInterproscan
PF16908
all species →		VPS13_ext_choreinVacuolar sorting-associated protein 13, extended-choreinRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031645
all species →		DomainVacuolar protein sorting-associated protein 13, DH-like domainInterproscan
IPR026854
all species →		DomainVacuolar protein sorting-associated protein 13-like, N-terminal domainInterproscan
IPR039782
all species →		FamilyIntermembrane lipid transfer protein VPS13BInterproscan
IPR031646
all species →		DomainVacuolar protein sorting-associated protein 13, extended choreinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12517
all species →		VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 13BInterproscan

 Gene Ontology
No Gene Ontology signature was detected for PcrG027009.mRNA1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19526VPS13B; vacuolar protein sorting-associated protein 13B-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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