Gene detail

Detailed information of PcrG028443.mRNA1 in Podabacia crustacea

Genomic Location: scaffold_94:3482929...3486267
NR annotation: no NCBI-NR hit recorded
Species Podabacia crustacea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009968 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02110 all species →	HK	Hydroxyethylthiazole kinase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000417 all species →	Family	Hydroxyethylthiazole kinase	Interproscan
IPR029056 all species →	Homologous_superfamily	Ribokinase-like	Interproscan

PANTHER

No PANTHER signature was recorded for PcrG028443.mRNA1 in Podabacia crustacea.

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0004417 all species →	Molecular Function	hydroxyethylthiazole kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0009228 all species →	Biological Process	thiamine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00878	thiM; hydroxyethylthiazole kinase	EC:2.7.1.50	Riboflavin metabolism	ko00740	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.