Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.20026_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000006:3762962...3766276
NR annotation: CAH3147627.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O08523	Alpha-tectorin OS=Mus musculus OX=10090 GN=Tecta PE=1 SV=2
Q5R5C1	Uromodulin OS=Pongo abelii OX=9601 GN=UMOD PE=2 SV=1
Q9D733	Pancreatic secretory granule membrane major glycoprotein GP2 OS=Mus musculus OX=10090 GN=Gp2 PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00100	Zona_pellucida	Zona pellucida-like domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035976	Homologous_superfamily	Sushi/SCR/CCP superfamily	Interproscan
IPR001507	Domain	Zona pellucida domain	Interproscan
IPR000436	Domain	Sushi/SCR/CCP domain	Interproscan
IPR042235	Homologous_superfamily	Zona pellucida, ZP-C domain	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14002	ENDOGLIN/TGF-BETA RECEPTOR TYPE III	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005615	Cellular Component	extracellular space	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan