Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.20623_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000007:4657084...4658538
NR annotation: XP_027039663.1, elongin-B-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q15370	Elongin-B OS=Homo sapiens OX=9606 GN=ELOB PE=1 SV=1
P62869	Elongin-B OS=Mus musculus OX=10090 GN=Elob PE=1 SV=1
P62870	Elongin-B OS=Rattus norvegicus OX=10116 GN=Elob PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039049	Family	Elongin B	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13248	TRANSCRIPTION ELONGATION FACTOR B POLYPEPTIDE 2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006368	Biological Process	transcription elongation by RNA polymerase II	Interproscan
GO:0030891	Cellular Component	VCB complex	Interproscan
GO:0070449	Cellular Component	elongin complex	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K03873	ELOB, TCEB2; elongin-B	-	DNA repair and recombination proteins	ko03400	deepkoala