Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.25297_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000022:2753094...2757303
NR annotation: RMX56064.1, hypothetical protein pdam_00020393 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q9VPH8	Retinoblastoma-binding protein 5 homolog OS=Drosophila melanogaster OX=7227 GN=Rbbp5 PE=1 SV=2
Q15291	Retinoblastoma-binding protein 5 OS=Homo sapiens OX=9606 GN=RBBP5 PE=1 SV=2
Q8BX09	Retinoblastoma-binding protein 5 OS=Mus musculus OX=10090 GN=Rbbp5 PE=1 SV=2

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037850	Family	Retinoblastoma-binding protein 5/Swd1	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44040	RETINOBLASTOMA-BINDING PROTEIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0048188	Cellular Component	Set1C/COMPASS complex	Interproscan
GO:0051568	Biological Process	obsolete histone H3-K4 methylation	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan