Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.541_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000000:6231429...6234340
NR annotation: XP_027053199.1, arfaptin-2-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q3ZCL5	Arfaptin-2 OS=Bos taurus OX=9913 GN=ARFIP2 PE=2 SV=1
P53365	Arfaptin-2 OS=Homo sapiens OX=9606 GN=ARFIP2 PE=1 SV=1
Q8K221	Arfaptin-2 OS=Mus musculus OX=10090 GN=Arfip2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06456	Arfaptin	Arfaptin-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030798	Family	Arfaptin family	Interproscan
IPR010504	Domain	Arfaptin homology (AH) domain	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12141	ARFAPTIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005543	Molecular Function	phospholipid binding	Interproscan
GO:0006886	Biological Process	intracellular protein transport	Interproscan
GO:0032588	Cellular Component	trans-Golgi network membrane	Interproscan
GO:0034315	Biological Process	regulation of Arp2/3 complex-mediated actin nucleation	Interproscan
GO:0019904	Molecular Function	protein domain specific binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20314	ARFIP; arfaptin	-	Membrane trafficking	ko04131	deepkoala