Detailed information of Pocillopora_acuta_HIv2___RNAseq.7998_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000009:2528437...2541030
NR annotation: CAH3031318.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O08722Netrin receptor UNC5B OS=Rattus norvegicus OX=10116 GN=Unc5b PE=1 SV=1
Q8K1S3Netrin receptor UNC5B OS=Mus musculus OX=10090 GN=Unc5b PE=1 SV=1
Q6UXZ4Netrin receptor UNC5D OS=Homo sapiens OX=9606 GN=UNC5D PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17217UPAUPA domainDomainInterproscan
PF00090TSP_1Thrombospondin type 1 domainDomainInterproscan
PF00531DeathDeath domainDomainInterproscan
PF00791ZU5ZU5 domainFamilyInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR036383Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR037936FamilyNetrin receptor UNC5Interproscan
IPR033772DomainUPA domainInterproscan
IPR000906DomainZU5 domainInterproscan
IPR011029Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR000488DomainDeath domainInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003410DomainHYR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12582NETRIN RECEPTOR UNC5Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005042Molecular Functionnetrin receptor activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0038007Biological Processnetrin-activated signaling pathwayInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

TOP