Detailed information of Pocillopora_acuta_HIv2___RNAseq.8665_t in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000010:3734240...3752102
NR annotation: XP_027059389.1, thrombospondin-3-like, partial [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P07996Thrombospondin-1 OS=Homo sapiens OX=9606 GN=THBS1 PE=1 SV=2
Q3SWW8Thrombospondin-4 OS=Bos taurus OX=9913 GN=THBS4 PE=2 SV=1
P35443Thrombospondin-4 OS=Homo sapiens OX=9606 GN=THBS4 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05735TSP_CThrombospondin C-terminal regionFamilyInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF02412TSP_3Thrombospondin type 3 repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008859DomainThrombospondin, C-terminalInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR028974Homologous_superfamilyTSP type-3 repeatInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR003367RepeatThrombospondin, type 3-like repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10199THROMBOSPONDINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0062023Cellular Componentcollagen-containing extracellular matrixInterproscan

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