Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10056.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000021:1804001...1811615
NR annotation: XP_027044999.1, protein FAM50A-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q299F9Protein FAM50 homolog OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=GA11514 PE=3 SV=1
Q9VAY7Protein FAM50 homolog OS=Drosophila melanogaster OX=7227 GN=CG12259 PE=2 SV=1
Q9WV03Protein FAM50A OS=Mus musculus OX=10090 GN=Fam50a PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04921XAP5XAP5, circadian clock regulator C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR048337DomainFAM50A/XAP5, C-terminal domainInterproscan
IPR007005FamilyXAP5 proteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12722XAP-5 PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006325Biological Processchromatin organizationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13119FAM50, XAP5; protein FAM50-Spliceosomeko03041deepkoala

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