Genomic Location: Pocillopora_acuta_HIv2___Sc0000021:2031680...2035207
NR annotation: CAB3986322.1, Retrovirus-related Pol poly from transposon opus [Paramuricea clavata]
| CDS |
| Pocillopora_acuta_HIv2___RNAseq.g10071.t1 |
| Transcript |
| Pocillopora_acuta_HIv2___RNAseq.g10071.t1 |
| Protein |
| Pocillopora_acuta_HIv2___RNAseq.g10071.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF13650 | Asp_protease_2 | Aspartyl protease | Domain | Interproscan |
| PF17919 | RT_RNaseH_2 | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR021109 | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR051320 | Family | Viral Replication and Maturation Polyprotein | Interproscan |
| IPR041577 | Domain | Reverse transcriptase/retrotransposon-derived protein, RNase H-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33064 | POL PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| - | - | - | - |
