Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10126.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000021:3242571...3243693
NR annotation: CAH3153813.1, unnamed protein product [Pocillopora meandrina]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7RZH4	ATP-dependent RNA helicase mak-5 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=mak-5 PE=3 SV=1
P25888	ATP-dependent RNA helicase RhlE OS=Escherichia coli (strain K12) OX=83333 GN=rhlE PE=1 SV=3
Q553B1	ATP-dependent RNA helicase ddx46 OS=Dictyostelium discoideum OX=44689 GN=helB1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24031	RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan