Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10183.t2 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:562058...573634
NR annotation: XP_027041568.1, protein SERAC1-like isoform X1 [Pocillopora damicornis]
Species abbreviation PACUT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5SNQ7Protein SERAC1 OS=Danio rerio OX=7955 GN=serac1 PE=3 SV=1
Q2TBM9Protein SERAC1 OS=Bos taurus OX=9913 GN=SERAC1 PE=2 SV=1
Q96JX3Protein SERAC1 OS=Homo sapiens OX=9606 GN=SERAC1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005481 (this species only)

 Pfam domain
No Pfam domain signature was detected for Pocillopora_acuta_HIv2___RNAseq.g10183.t2. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →		Homologous_superfamilyArmadillo-type foldInterproscan
IPR052374
all species →		FamilySERAC1Interproscan
IPR029058
all species →		Homologous_superfamilyAlpha/Beta hydrolase foldInterproscan
IPR011989
all species →		Homologous_superfamilyArmadillo-like helicalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48182
all species →		PROTEIN SERAC1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for Pocillopora_acuta_HIv2___RNAseq.g10183.t2. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23504SERAC1; protein SERAC1-Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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