Gene detail

Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10357.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:2203494...2206062
NR annotation: XP_027036506.1, ubiquitin domain-containing protein 2-like [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Gene family

Uniprot term	Description
Q6PGH0	Ubiquitin domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubtd2 PE=2 SV=1
Q640W6	Ubiquitin domain-containing protein 1 OS=Xenopus laevis OX=8355 GN=ubtd1 PE=2 SV=1
Q5EAE3	Ubiquitin domain-containing protein 2 OS=Bos taurus OX=9913 GN=UBTD2 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UBL\|NEDD8
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_Other
Ubiquitin Family	ULD\|UFD/UBQ\|UBQ_PIM

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00240	ubiquitin	Ubiquitin family	Domain	Interproscan
PF16455	UBD	Ubiquitin-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019956	Domain	Ubiquitin domain	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR039869	Family	Ubiquitin domain-containing protein 1/2	Interproscan
IPR000626	Domain	Ubiquitin-like domain	Interproscan
IPR032752	Domain	DC-UbP/UBTD2, N-terminal domain	Interproscan
IPR038169	Homologous_superfamily	DC-UbP/UBTD2, N-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13609	UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K13993	HSP20; HSP20 family protein	-	Chaperones and folding catalysts	ko03110	deepkoala