Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10360.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:2221181...2225098
NR annotation: RMX61471.1, hypothetical protein pdam_00003559 [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P29136Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2
O55123Stromelysin-2 OS=Mus musculus OX=10090 GN=Mmp10 PE=2 SV=1
Q5XF51Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00045HemopexinHemopexinRepeatInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR018486Conserved_siteHemopexin, conserved siteInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan

TOP