Detailed information of Pocillopora_acuta_HIv2___RNAseq.g10657.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___Sc0000001:6039007...6045259
NR annotation: CAH3122728.1, unnamed protein product, partial [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9NPC8Homeobox protein SIX2 OS=Homo sapiens OX=9606 GN=SIX2 PE=1 SV=1
Q62232Homeobox protein SIX2 OS=Mus musculus OX=10090 GN=Six2 PE=1 SV=2
Q6NZ04Homeobox protein six1b OS=Danio rerio OX=7955 GN=six1b PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16878SIX1_SDTranscriptional regulator, SIX1, N-terminal SD domainDomainInterproscan
PF05920Homeobox_KNHomeobox KN domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR031701DomainHomeobox protein SIX1, N-terminal SD domainInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR001356DomainHomeobox domainInterproscan
IPR008422DomainHomeobox KN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10390HOMEOBOX PROTEIN SIXInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005667Cellular Componenttranscription regulator complexInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

TOP