Detailed information of Pocillopora_acuta_HIv2___RNAseq.g1076.t1 in Pocillopora acuta

Genomic Location: Pocillopora_acuta_HIv2___xfSc0000002:8335956...8336660
NR annotation: XP_027035558.1, protein giant-like [Pocillopora damicornis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q92172Transcription factor VBP OS=Gallus gallus OX=9031 GN=TEF PE=1 SV=2
Q9JLC6Thyrotroph embryonic factor OS=Mus musculus OX=10090 GN=Tef PE=2 SV=1
P41224Thyrotroph embryonic factor OS=Rattus norvegicus OX=10116 GN=Tef PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07716bZIP_2Basic region leucine zipperCoiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040223FamilyPAR basic leucine zipper proteinInterproscan
IPR004827DomainBasic-leucine zipper domainInterproscan
IPR046347Homologous_superfamilyBasic-leucine zipper domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11988THYROTROPH EMBRYONIC FACTOR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan

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